PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023538082.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ZF-HD
Protein Properties Length: 341aa    MW: 35732.8 Da    PI: 6.7929
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023538082.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer101.75e-32104160360
     ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60 
                     +vrY+eClkNhAas+Gg+ +DGCgEfmps ge+gt +alkCaAC+CHRnFHR+e + e
  XP_023538082.1 104 GVRYRECLKNHAASVGGNIYDGCGEFMPS-GEDGTLEALKCAACECHRNFHRKEIDGE 160
                     79**************************9.999********************98765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MDMREQEKEV MMPAVSGGGG GYAHIFGETS SGVVERRIES VHNGSHHHIQ PEHLDADLVA  60
GEDVRGGGGG GGGGGGGGGG GGGGGGGGGG GGGGRSKVRG AGTGVRYREC LKNHAASVGG  120
NIYDGCGEFM PSGEDGTLEA LKCAACECHR NFHRKEIDGE NQLSIGANYR RGLMLPHLQL  180
PAPLPSPSAL HGHHKFSMAL NLHSSPTAPI IAPMNVAYAG GGGTESSSED LNVFQSNAEV  240
MPPSSYTLSK KRFRTKFTQE QKDRMLEFAE KIGWRIQKQD EEEVERFCSE VGVKRQVLKV  300
WMHNNKNTMK KQNDNNEPEL AVAVAVAVAG AGSGAAVMSE S
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16595RGGGGGGGGGGGGGGGGGGGGGGGGGGGGGR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75240.13e-68ZF-HD family protein