PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023537686.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family WRKY
Protein Properties Length: 310aa    MW: 34143.6 Da    PI: 8.9025
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023537686.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY932.2e-29147207160
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS-- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhek 60 
                     ++Dgy+WrKYGqK+ k+++ pr+YY+C++a +Cpvkkkv+rs +d ++++ tYegeHnh+k
  XP_023537686.1 147 VKDGYQWRKYGQKVTKDNPSPRAYYKCSFApSCPVKKKVQRSVQDSSYLVATYEGEHNHKK 207
                     58***************************99****************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MEPSPAINTS LGLNFNPPPY TDDGSPANIS VTPTKEEAPG VIVEKLNRIS SENQKLNQML  60
GVVVENYSVL RNQVVDLMIK SRKRKAGCDN CNFFNRSGSS GADALTDQYC CCGSDDDSCH  120
KRPRESSRPK IKRVLVQTPI SDSSLAVKDG YQWRKYGQKV TKDNPSPRAY YKCSFAPSCP  180
VKKKVQRSVQ DSSYLVATYE GEHNHKKPNS GIEYQLVGPI HLGSKLDSSL SSPSSSVISP  240
SLPSVTTFDL TKSQSIDTLK SLVPELERPS TSTQQMVCQQ MASLLTRDPN FTKALVTAIT  300
GNMVEKEVWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.12e-62WRKY family protein