PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023537094.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

DBB

Protein Properties

Length: 306aa MW: 33051.5 Da PI: 7.1934

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023537094.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	19.7	1.8e-06	4	43	5	38
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 C+ +e+ ++ fC+ ++ lC+ C H+ H+ XP_023537094.1 4 QCDVCEKGDASVFCTADEAALCNICDHRVHHAnklaskHR 43 7****88*****************964446777776 PP
2	zf-B_box	24.1	7.2e-08	54	95	2	37
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 e+++C+ + e + lfC++++ lC++C + +H+ H XP_023537094.1 54 EAPVCDVCRERRGFLFCQQDRAILCRECDDPIHSAneltmkH 95 6799*****9*******************655666666 PP

Sequence ? help Back to Top
Protein Sequence Length: 306 aa Download sequence
MKIQCDVCEK GDASVFCTAD EAALCNICDH RVHHANKLAS KHRRFSLLRS AAAEAPVCDV 60 CRERRGFLFC QQDRAILCRE CDDPIHSANE LTMKHDRFLL TGIKLSTTAA LYAPPPSDEK 120 PIKTGHRTGF DHKSKGSVKK PTAVPAAPVG CTSSVCVNAS TNIPPAVAMN KGGGGQIPTG 180 GGGSASSISE YLMETLPGWH FEDLLDSSVP PPFMECEGLG LPFVEGDFNS GLSPSERLEL 240 WVPQGPMYGS GLMMNSGVKD TKDLVVNSSK VNRAWTDDCF TVPQITSTTA PSAGFKRSRS 300 FWYNNH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75540.1	3e-72	DBB family protein