PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023536992.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

MYB_related

Protein Properties

Length: 626aa MW: 66566.3 Da PI: 8.2287

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023536992.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.2	8e-08	201	245	1	44
TSSS-HHHHHHHHHHHHHTTTT-HHHHHH..HHTTTS-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIar..tmgkgRtlkqcksrw 44 r++W++ Ed+ l avk+ G g+W+ I r + Rt+ q+ rw XP_023536992.1 201 RKPWSEAEDLELMAAVKKCGEGNWANILRgdFLS-DRTASQLSQRW 245 789************************9822354.77777777777 PP

Sequence ? help Back to Top
Protein Sequence Length: 626 aa Download sequence
MKLKKRSVSE KDISTFLPRY SPTTVLTLLQ EVSQVSEAKP KIDWNEIVKN TSTGISNPRE 60 YQMLWRHLAY RHALLHNLED ETAPLEDDSD LECELEPFPS FSCETSTEAA ACAKVFIASG 120 SSSHLSLPSS STIEAPLTIN LPRSYMAGVQ FEDADPACSI RGASITVPVS VQRQPVLTPP 180 SAEGLTTNGS TYGNNASRRK RKPWSEAEDL ELMAAVKKCG EGNWANILRG DFLSDRTASQ 240 LSQRWAIIKK RHGNLNVGAN TAGTQLSEVQ LAARHAMSLA LDRPVGSLKA ARISGSASTN 300 TIGNGSSLAP VASSEQVQDK LHQSPTHTKP HPVGSSSLTA KAQVTASKKM IPKSSFDSDC 360 IVRAAAVAAG ARIASPADAA SLLKAAQSKN AIHIMAKVPA STKTPTPARG PNHLEAHPSI 420 KTTTLPNTSA VMPSVTHGGG PVKITSSTTA TLSSVPTDQN ISVASVTAAA NPLSEKETKT 480 TEETRGLGLG GVQATAQKDC RSRQSISERV QEEKPADLGP PLKRQATESS NCSSSQNTST 540 ADVDIKVETG NQVEERQNSN TSVIPGSSNQ QGIANQSQVE RMKPQDMDID NDGKDRPIMK 600 TDGRSENSVH KEAASEISKG NTKDTN

Sequence ? help Back to Top

Protein Sequence Length: 626 aa Download sequence

MKLKKRSVSE KDISTFLPRY SPTTVLTLLQ EVSQVSEAKP KIDWNEIVKN TSTGISNPRE  60
YQMLWRHLAY RHALLHNLED ETAPLEDDSD LECELEPFPS FSCETSTEAA ACAKVFIASG  120
SSSHLSLPSS STIEAPLTIN LPRSYMAGVQ FEDADPACSI RGASITVPVS VQRQPVLTPP  180
SAEGLTTNGS TYGNNASRRK RKPWSEAEDL ELMAAVKKCG EGNWANILRG DFLSDRTASQ  240
LSQRWAIIKK RHGNLNVGAN TAGTQLSEVQ LAARHAMSLA LDRPVGSLKA ARISGSASTN  300
TIGNGSSLAP VASSEQVQDK LHQSPTHTKP HPVGSSSLTA KAQVTASKKM IPKSSFDSDC  360
IVRAAAVAAG ARIASPADAA SLLKAAQSKN AIHIMAKVPA STKTPTPARG PNHLEAHPSI  420
KTTTLPNTSA VMPSVTHGGG PVKITSSTTA TLSSVPTDQN ISVASVTAAA NPLSEKETKT  480
TEETRGLGLG GVQATAQKDC RSRQSISERV QEEKPADLGP PLKRQATESS NCSSSQNTST  540
ADVDIKVETG NQVEERQNSN TSVIPGSSNQ QGIANQSQVE RMKPQDMDID NDGKDRPIMK  600
TDGRSENSVH KEAASEISKG NTKDTN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09710.1	3e-72	MYB_related family protein