PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023536907.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | WOX | ||||||||
Protein Properties | Length: 172aa MW: 19252.2 Da PI: 10.5975 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 69.4 | 4.6e-22 | 72 | 131 | 3 | 57 |
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eq+ +Le l+++ r+p+a+++e+++++l +++ ++V++WFqN++a+e++ XP_023536907.1 72 TRWNPTQEQIAILEMLYRRgMRTPNAQQIEQITAQLgkygKIEGKNVFYWFQNHKARERQ 131 7*****************99**************************************97 PP | |||||||
2 | Wus_type_Homeobox | 119.7 | 1.3e-38 | 72 | 133 | 4 | 65 |
Wus_type_Homeobox 4 tRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 tRW+Pt+eQi iLe+ly++G+rtPn+++i++ita+L +yGkie+kNVfyWFQN+kaRerqkq XP_023536907.1 72 TRWNPTQEQIAILEMLYRRGMRTPNAQQIEQITAQLGKYGKIEGKNVFYWFQNHKARERQKQ 133 8***********************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 172 aa Download sequence |
MGLTMKLHHF SPCSWDEPSL SLACTKRLRP PPPTSATSTL TAFDLKTFIK PDTKKDPSSP 60 RTGVVEMQPG GTRWNPTQEQ IAILEMLYRR GMRTPNAQQI EQITAQLGKY GKIEGKNVFY 120 WFQNHKARER QKQKRNTLGL AHSSPITPPT TTTIVTAIPF DPSVGSSFTI VL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G46480.1 | 7e-50 | WOX family protein |