PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023536664.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 250aa    MW: 27651.6 Da    PI: 4.6126
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023536664.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2569.7e-1854103255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      y+GVr +  +g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++ a++ ++g
  XP_023536664.1  54 IYRGVRMRV-WGKWVSEIREPKK---KSRIWLGTFATPEMAARAHDVAALTIKG 103
                     69****999.**********854...6**********************99887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MANATVPETD LGGVNSSPSS SSSSSRPKQD GTQLKRGREN NNNSNNNNNN RHPIYRGVRM  60
RVWGKWVSEI REPKKKSRIW LGTFATPEMA ARAHDVAALT IKGNSAILNF PELAASFPRP  120
VSSSPRDVQF AAGLAASMQL PNVDLPPPPP PLSPSSQSPS PPLSSSSELD ESTPEELSEI  180
VKLPSLGTSY EESGEFVCDE WQYSCGPWYQ NQSRREEEEE EAYEYFRDQM AMAETECVIP  240
ASFQPLPFSW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.12e-49ERF family protein