PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_023536424.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
|
||||||||
Family | C2H2 | ||||||||
Protein Properties | Length: 202aa MW: 22362.7 Da PI: 7.1465 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.3 | 0.00025 | 51 | 73 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C + F ++ L H++ H XP_023536424.1 51 FSCNYCQRKFFSSQALGGHQNAH 73 89*****************9988 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 202 aa Download sequence |
MEPLTDRNPL SGDGEEDDER EPAELSDDRS TLLDLQLSSN SSDATTKPRV FSCNYCQRKF 60 FSSQALGGHQ NAHKRERTLA KRVQRFDWGA AIPLHGGAFD RRSLGIHAHS QQIQKPVGFF 120 SGPGPTSQLW PRPLFMGQQP AVGRLTPEFG GRNFGRFDDV TGWPAIGSSN AGNERSNNVS 180 IVHSQTKPDQ DQTNFLDLSL KL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G80730.1 | 3e-31 | C2H2 family protein |