PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023535967.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family WRKY
Protein Properties Length: 326aa    MW: 36891.5 Da    PI: 5.4922
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023535967.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.95.6e-30167226159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     ++Dgy+WrKYGqK+ ++++ pr+Y++C+sa +Cpvkkkv+rs edp +++ tYegeHnh 
  XP_023535967.1 167 VKDGYQWRKYGQKVTRDNPSPRAYFKCSSApNCPVKKKVQRSLEDPAILVATYEGEHNHA 226
                     58**************************999****************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MDIFLDLNMD PSSSYANSAM DDPLHPSKKH KFEEEMYWEN EHLSLSLANK AQGSDSSRRL  60
EEELDRKMVE NGKLSQMLRI MYEKYINLQK QVMCLVSHQK QSSEMEALIS SRKREEEEEE  120
EEEEEEGICS TRDEDFNRWL KRPRLNGNPK VSKVFVHKDA SDPSLVVKDG YQWRKYGQKV  180
TRDNPSPRAY FKCSSAPNCP VKKKVQRSLE DPAILVATYE GEHNHASHFQ TELSLRSING  240
GKGSAVPVLA TIKPSCATVT LDLIHEDGLF KSPKDYASSE LAVSTEAAVW QEFLVQQMAS  300
SLKKDPEFAG IVAGAISDKV LGNQTN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.13e-58WRKY family protein