PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023535459.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 266aa MW: 29473.3 Da PI: 10.1738

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023535459.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	100.7	1e-31	92	145	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH++F++ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ XP_023535459.1 92 PRMRWTTTLHAHFIHAVELLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRT 145 9****************************************************7 PP
2	Myb_DNA-binding	47.2	5e-15	93	144	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWTt ++ +++av++lGg+ t+k++ + m+ k +tl ++ks++q+y+ XP_023535459.1 93 RMRWTTTLHAHFIHAVELLGGHeraTPKSVLELMNvKDLTLAHVKSHLQMYR 144 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 266 aa Download sequence
MNTPPSLPDL SLQISLPMST KPNPPSSTTT HSGCSAKSDL SHKNNLFRLG FEVGDMGLLQ 60 RHHQACNVRC RRDFKRSVGD VAYGVKRSPR APRMRWTTTL HAHFIHAVEL LGGHERATPK 120 SVLELMNVKD LTLAHVKSHL QMYRTVKNTI KGTDDSGRPE LEPDAVVLSS SSSSSSSASA 180 QNSNFQWRRL QRIQRSSLVT SMHKSCDRTK SNGDVFAKSR GIKVEGSNGD YEKAIAMQRI 240 NLEFTLGSPS WQLDYGDANE LALLNC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G42630.1	9e-54	G2-like family protein