PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023534837.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

MYB_related

Protein Properties

Length: 569aa MW: 61637.4 Da PI: 9.3513

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023534837.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.2	1.8e-08	205	249	1	44
TSSS-HHHHHHHHHHHHHTTTT-HHHHHH..HHTTTS-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIar..tmgkgRtlkqcksrw 44 r++W++ Ed+ l av+++G g+W+ I + g Rt+ q+ rw XP_023534837.1 205 RKPWSKTEDLELMAAVEKYGEGNWANILKadFKG-DRTASQLSQRW 249 789************************7621455.89999988888 PP

Sequence ? help Back to Top
Protein Sequence Length: 569 aa Download sequence
MIEIKEKPKK GTISNEDSSA VLERYSVRTI FTLLREVAHV SEVRIDWDKL VKNTSTGISN 60 VREYQLLWRH LAYRHTLLEN VDSVTDPLDY DSDLDFEIEP FPSVSNESLN EAAACVKVLI 120 ANGIPSESDV PSSSVVEAPL TIGISSNSRP FRASLENPQS ACLMQGMYVT FPISVQRQPL 180 PTPSATEVFD VNGAAGGNAA SRKRRKPWSK TEDLELMAAV EKYGEGNWAN ILKADFKGDR 240 TASQLSQRWS IIRKRRGKLS VGANTTSTQT SKAQIDAAHR ALSLALDLPV NNSKSAANSN 300 MNSSTVSSTS GAEAPVQIQN QSPQVLVPLR PLQVKPLPSA AKSGINTAKN TLMMKSTHNS 360 DSIVRATAVA AGARIVSPSD AASLMKAAQT KNAIHIKSKC VSSIQPPVLG NASTHLDARP 420 SVHYISTGRT ATPGSNYVGG KSTMAGKYSM KYVSPKAPYN CSTAVSTNPP SNQISPTTES 480 PLKQEVKSSE ECKISKPIIT SKDDFRENRT VVRDVFASQI SDWESGSRST CIENQNTSLN 540 MEIDENDIKA ACPKQDENKT KANDVKIRG

Sequence ? help Back to Top

Protein Sequence Length: 569 aa Download sequence

MIEIKEKPKK GTISNEDSSA VLERYSVRTI FTLLREVAHV SEVRIDWDKL VKNTSTGISN  60
VREYQLLWRH LAYRHTLLEN VDSVTDPLDY DSDLDFEIEP FPSVSNESLN EAAACVKVLI  120
ANGIPSESDV PSSSVVEAPL TIGISSNSRP FRASLENPQS ACLMQGMYVT FPISVQRQPL  180
PTPSATEVFD VNGAAGGNAA SRKRRKPWSK TEDLELMAAV EKYGEGNWAN ILKADFKGDR  240
TASQLSQRWS IIRKRRGKLS VGANTTSTQT SKAQIDAAHR ALSLALDLPV NNSKSAANSN  300
MNSSTVSSTS GAEAPVQIQN QSPQVLVPLR PLQVKPLPSA AKSGINTAKN TLMMKSTHNS  360
DSIVRATAVA AGARIVSPSD AASLMKAAQT KNAIHIKSKC VSSIQPPVLG NASTHLDARP  420
SVHYISTGRT ATPGSNYVGG KSTMAGKYSM KYVSPKAPYN CSTAVSTNPP SNQISPTTES  480
PLKQEVKSSE ECKISKPIIT SKDDFRENRT VVRDVFASQI SDWESGSRST CIENQNTSLN  540
MEIDENDIKA ACPKQDENKT KANDVKIRG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09710.1	3e-68	MYB_related family protein