PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023534748.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 252aa    MW: 28576.4 Da    PI: 7.6917
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023534748.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.74.3e-1376128155
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                     ++ +h  +Er+RR+++ s +++Lr+llP+      ++K s  +   +Av+YI+++q
  XP_023534748.1  76 KKIMHRDVERQRRQDMASLYATLRSLLPHeY---LKGKRSICDHMLEAVKYIRHMQ 128
                     5789*************************77...9********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MNDNVGSPFS YDLGEELFPL PSLSCIDIPV PQFPSISPLD NNKSGTQKPK NGRRKNPPAN  60
SSDDIGDMNP NEHKKKKIMH RDVERQRRQD MASLYATLRS LLPHEYLKGK RSICDHMLEA  120
VKYIRHMQSR IQDLSNKRDE LKRVSDKNPV ATMVETLDSS KRESVLVRAR NESGGVQVVL  180
NTATQHNLPV SNILRDLATE GLEILSYIST KVNDSFIHTI ECQTLVDSNH TPSIDVSELQ  240
HKLMNLEYFL SN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25410.16e-36bHLH family protein