PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023534342.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family WRKY
Protein Properties Length: 334aa    MW: 36471.7 Da    PI: 7.0932
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023534342.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.32.1e-30174232259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                      D ++WrKYGqK++kgs++pr+YYrC+s+ gC ++k+vers+ dp+++++tY+g+H+h+
  XP_023534342.1 174 TDMWAWRKYGQKPIKGSPYPRNYYRCSSSkGCGARKQVERSTADPETFIVTYTGDHTHP 232
                     69*************************998****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MAAGDDDWDL SAVVRSCYSG SSTSSTSTAA DPTAASAAET ALSCLASLTF DDDPNNVAFS  60
FSDILHPQQP NGFHELHQAF ISFLPNPVAP AVAPAAPVIP NPVPTRQSRH GIKPIRPLPD  120
PGAVALQSHH RQQPLFRPDF PNSPMTPPHI PKSRKRKNQQ KRTVCHVTAD NLSTDMWAWR  180
KYGQKPIKGS PYPRNYYRCS SSKGCGARKQ VERSTADPET FIVTYTGDHT HPRPTHRNSL  240
AGSSRNRSSS AIPMKNLTMG DPDRSLLGTA TVGSPMTPLN EDGGSGEKEG EILEDLSIES  300
EEYEDNDILI PNLMMRNEIF VGFEELGCSP RRKA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52830.12e-49WRKY family protein