PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023534178.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | HB-other | ||||||||
Protein Properties | Length: 501aa MW: 56053.9 Da PI: 7.3761 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 60.5 | 2.6e-19 | 22 | 77 | 2 | 57 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +kR t++q+ +Le+++++++yp++e++ +LA++lgLte+q++ WF+ rR k+k+ XP_023534178.1 22 KKRKLKTPTQVIALEKFYNEHKYPTEEMKSQLAEQLGLTEKQISGWFCHRRLKDKR 77 89****************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 501 aa Download sequence |
MEEELGNVMH SEENKDSTEK NKKRKLKTPT QVIALEKFYN EHKYPTEEMK SQLAEQLGLT 60 EKQISGWFCH RRLKDKRFCE TYTSVRQDRS SGVIQDLGSG LAQDSCGSTK NGDYWYIDPR 120 EVESQKPYGH ELATDNVLER RSQYTENVSN MDNTPSESSS SLKDRVLSQS ENPYDTEVSQ 180 YLTHEGAIPS SNPKALNSLR YKPSGYLKVK GEAENAAITA VKRQLGVQYR EDGPPLGVEF 240 QPLPPGAFES PAKGPIHDSY YTGNHPILPR SPEISTTKKQ RALGSRYEVH SSNMSSQDSY 300 MEEAVPTSAT CRPECHDKNS MNQLKKGSNY YNKTDPFPPQ NSPLNMYEES GGLTLSSSSK 360 RDHRINSSYN IPSSRTDSVS NNHGSCSSKV ANEQTEMQLH NHGCVGSKSF YRSGKTMPKE 420 MFNGEEKTVN GSSDPVRGKI LPTKDMAVAN RCPLDFPRSN YAAKSSFSGK PGRKNHARRS 480 TTEMLYSFTV DEAEDTSSSL D |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G03250.1 | 4e-89 | HB-other family protein |