PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023534156.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 227aa    MW: 26079.6 Da    PI: 7.5495
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023534156.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP231.44.7e-10105145451
             AP2   4 kGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                     +GV++  k+ +W A I++      +k+++lg+  + eeAa ++++a+ 
  XP_023534156.1 105 RGVYF--KNMKWQAAIKVD-----KKQIHLGTVESQEEAAHLYDRAAF 145
                     9**98..47*********4.....5********************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MVSLRRRKLL GLCTGKGSLD APVSKFSENS TAEDLEHSSI SVHPICSNEF NEIENPVANL  60
ETESSRVSVL DTSKEKSDEP FAEPPVKHRK RHRRKQFPEE CFLMRGVYFK NMKWQAAIKV  120
DKKQIHLGTV ESQEEAAHLY DRAAFMCGRE PNFELPEAEK KELRKVNWDE FLAMTRLAIA  180
NKKQKRVSPE SKNSKLPMLG NDDLNKRQDE FSDLSAPEDI EQLAMKF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.12e-40ERF family protein