PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023534145.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | ERF | ||||||||
Protein Properties | Length: 240aa MW: 26091.6 Da PI: 9.1264 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.2 | 1.1e-19 | 121 | 171 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrdp +ng +r++lg++ tae+Aa a+++a+ +++g XP_023534145.1 121 HYRGVRQRP-WGKFAAEIRDPAKNG--ARVWLGTYETAEDAALAYDRAAYRMRG 171 8********.***********9987..*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 240 aa Download sequence |
MYHTTKTEPD FAYLGPIRRH LLGESEAAGP VFNQTGSFSS LIPCLHDNWG DLPLKVDDSE 60 DMLLAAVLGD AVGAGWVPSL GSCDFGFSAV KSEPEMIPVS FPPVQPNVAM RPAVVPQKGK 120 HYRGVRQRPW GKFAAEIRDP AKNGARVWLG TYETAEDAAL AYDRAAYRMR GSRALLNFPL 180 RVNSGEPEPV RITSKRSSPD LSSSPKRRKK ATSAVEGGGV QVEQQVASFT RGGQMFVSQC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17500.1 | 2e-56 | ERF family protein |