PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023532919.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

TALE

Protein Properties

Length: 570aa MW: 63965.2 Da PI: 5.9369

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023532919.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.3	6.2e-09	354	391	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps ++ LA+++gL+ +qV++WF N R + XP_023532919.1 354 FEHflHPYPSDVDKHILARQTGLSRSQVSNWFINARVR 391 554459******************************88 PP
2	BELL	113.3	1.3e-36	216	286	2	72
BELL 2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +++lq++k+kL s+leeV++rY++y+eq+++v++sFeavag g+a++Y +lA+ka+SrhFrcLkd i++qi XP_023532919.1 216 FMDLQRRKTKLFSMLEEVERRYRHYCEQMKAVVASFEAVAGSGAARVYSALASKAMSRHFRCLKDGIVGQI 286 689******************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 570 aa Download sequence
MARELCEGEE KSNEMVVGGG GFYYNSNSNL NIQTQFTSQI QTGFGSGGDP AEMFNLGTNE 60 STGGDEFHQN MMVVGPWGTA AQDSNNRFHL VDDDSALRCV FPCEPNERPS QGLSLSLSSS 120 NPSSIGLQSF ELRPQQNQHQ SSSLPIFQLR NSRFLAPAQD LLYEFCSLGI TINNNNNNKQ 180 GLDFSSSPKH KGNRPKQWEM EDGSSSTKIS LQSLDFMDLQ RRKTKLFSML EEVERRYRHY 240 CEQMKAVVAS FEAVAGSGAA RVYSALASKA MSRHFRCLKD GIVGQIQATK KAIEEKDPIT 300 PGTTRGETPR LKVIDQALRQ QRAFHQISMM ESHPWRPQRG LPERSVSVLR AWLFEHFLHP 360 YPSDVDKHIL ARQTGLSRSQ VSNWFINARV RLWKPMVEEM YLEETKEQGE EINNNFNGHS 420 SDGVADFDDE IDGHRSIPTR LVDQKPTPDQ LLRIESECMS SIISNNSEKN GSRSMKAMEN 480 QSFGRVGVDA FGTVELDFSS YNHHHSNSGG GGGVSLTLGL QQHATQSSVF FRRDEMEECE 540 PVQYSLLDGE TQNLPYRNLM GAQLLHDLAE

Sequence ? help Back to Top

Protein Sequence Length: 570 aa Download sequence

MARELCEGEE KSNEMVVGGG GFYYNSNSNL NIQTQFTSQI QTGFGSGGDP AEMFNLGTNE  60
STGGDEFHQN MMVVGPWGTA AQDSNNRFHL VDDDSALRCV FPCEPNERPS QGLSLSLSSS  120
NPSSIGLQSF ELRPQQNQHQ SSSLPIFQLR NSRFLAPAQD LLYEFCSLGI TINNNNNNKQ  180
GLDFSSSPKH KGNRPKQWEM EDGSSSTKIS LQSLDFMDLQ RRKTKLFSML EEVERRYRHY  240
CEQMKAVVAS FEAVAGSGAA RVYSALASKA MSRHFRCLKD GIVGQIQATK KAIEEKDPIT  300
PGTTRGETPR LKVIDQALRQ QRAFHQISMM ESHPWRPQRG LPERSVSVLR AWLFEHFLHP  360
YPSDVDKHIL ARQTGLSRSQ VSNWFINARV RLWKPMVEEM YLEETKEQGE EINNNFNGHS  420
SDGVADFDDE IDGHRSIPTR LVDQKPTPDQ LLRIESECMS SIISNNSEKN GSRSMKAMEN  480
QSFGRVGVDA FGTVELDFSS YNHHHSNSGG GGGVSLTLGL QQHATQSSVF FRRDEMEECE  540
PVQYSLLDGE TQNLPYRNLM GAQLLHDLAE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41410.1	1e-130	TALE family protein