PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023532707.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 394aa MW: 43476 Da PI: 6.6291

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023532707.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	89.5	3e-28	136	190	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k +++WtpeLH+rFv+aveqL G +kA+P++ilelm++++Lt+++v+SHLQkYR++ XP_023532707.1 136 KVKVDWTPELHRRFVQAVEQL-GVDKAVPSRILELMGIECLTRHNVASHLQKYRSH 190 5689***************.******************************86 PP
2	Myb_DNA-binding	40.6	6e-13	139	188	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT+e++ ++v+av+qlG + +++I + mg + +t+ ++ s++qky+ XP_023532707.1 139 VDWTPELHRRFVQAVEQLGVDkaVPSRILELMGiECLTRHNVASHLQKYR 188 57******************************999**********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 394 aa Download sequence
MLAVRIGNKD EEQGEVDSFS IAAEGFPDFD DDTHLLASIN FDDLFVGIND GDVLPDLEMD 60 HELLAQFSVN NSVSFEQFDD NSKSVNKDEG EGEEEGKAHG DQEIVTKIDE LAAKSKSGDK 120 INKSSPQSKN SQGKRKVKVD WTPELHRRFV QAVEQLGVDK AVPSRILELM GIECLTRHNV 180 ASHLQKYRSH RKHLLAREAE AASWSQRRHM YGAAAVNGGG KRELSSWGAP TTMGFPPMHP 240 HFRPLNVWPK YLQHSPSPPP PPALSWPYAA APPPPHDPSY WHHHHHQRVP NALTPGTPCF 300 PHSLPTNTRF GGAMFSVIPP PHPPYKLDLI TVGCSPPHPP LDSYPSKESI DSAIGDALAK 360 PWLPLPLGLK PPSLDSVKVE LQRQGIPRIP PSCA

Sequence ? help Back to Top

Protein Sequence Length: 394 aa Download sequence

MLAVRIGNKD EEQGEVDSFS IAAEGFPDFD DDTHLLASIN FDDLFVGIND GDVLPDLEMD  60
HELLAQFSVN NSVSFEQFDD NSKSVNKDEG EGEEEGKAHG DQEIVTKIDE LAAKSKSGDK  120
INKSSPQSKN SQGKRKVKVD WTPELHRRFV QAVEQLGVDK AVPSRILELM GIECLTRHNV  180
ASHLQKYRSH RKHLLAREAE AASWSQRRHM YGAAAVNGGG KRELSSWGAP TTMGFPPMHP  240
HFRPLNVWPK YLQHSPSPPP PPALSWPYAA APPPPHDPSY WHHHHHQRVP NALTPGTPCF  300
PHSLPTNTRF GGAMFSVIPP PHPPYKLDLI TVGCSPPHPP LDSYPSKESI DSAIGDALAK  360
PWLPLPLGLK PPSLDSVKVE LQRQGIPRIP PSCA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20570.1	7e-66	G2-like family protein