PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023532706.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 402aa MW: 44276 Da PI: 6.628

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023532706.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	77.3	1.9e-24	136	185	1	51
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 k +++WtpeLH+rFv+aveqL G +kA+P++ilelm++++Lt+++v+SHLQ XP_023532706.1 136 KVKVDWTPELHRRFVQAVEQL-GVDKAVPSRILELMGIECLTRHNVASHLQ 185 5689***************.*************************98 PP
2	Myb_DNA-binding	34.7	4e-11	139	185	2	45
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwq 45 WT+e++ ++v+av+qlG + +++I + mg + +t+ ++ s++q XP_023532706.1 139 VDWTPELHRRFVQAVEQLGVDkaVPSRILELMGiECLTRHNVASHLQ 185 57******************************999******99 PP

Sequence ? help Back to Top
Protein Sequence Length: 402 aa Download sequence
MLAVRIGNKD EEQGEVDSFS IAAEGFPDFD DDTHLLASIN FDDLFVGIND GDVLPDLEMD 60 HELLAQFSVN NSVSFEQFDD NSKSVNKDEG EGEEEGKAHG DQEIVTKIDE LAAKSKSGDK 120 INKSSPQSKN SQGKRKVKVD WTPELHRRFV QAVEQLGVDK AVPSRILELM GIECLTRHNV 180 ASHLQGLACT LLQKYRSHRK HLLAREAEAA SWSQRRHMYG AAAVNGGGKR ELSSWGAPTT 240 MGFPPMHPHF RPLNVWPKYL QHSPSPPPPP ALSWPYAAAP PPPHDPSYWH HHHHQRVPNA 300 LTPGTPCFPH SLPTNTRFGG AMFSVIPPPH PPYKLDLITV GCSPPHPPLD SYPSKESIDS 360 AIGDALAKPW LPLPLGLKPP SLDSVKVELQ RQGIPRIPPS CA

Sequence ? help Back to Top

Protein Sequence Length: 402 aa Download sequence

MLAVRIGNKD EEQGEVDSFS IAAEGFPDFD DDTHLLASIN FDDLFVGIND GDVLPDLEMD  60
HELLAQFSVN NSVSFEQFDD NSKSVNKDEG EGEEEGKAHG DQEIVTKIDE LAAKSKSGDK  120
INKSSPQSKN SQGKRKVKVD WTPELHRRFV QAVEQLGVDK AVPSRILELM GIECLTRHNV  180
ASHLQGLACT LLQKYRSHRK HLLAREAEAA SWSQRRHMYG AAAVNGGGKR ELSSWGAPTT  240
MGFPPMHPHF RPLNVWPKYL QHSPSPPPPP ALSWPYAAAP PPPHDPSYWH HHHHQRVPNA  300
LTPGTPCFPH SLPTNTRFGG AMFSVIPPPH PPYKLDLITV GCSPPHPPLD SYPSKESIDS  360
AIGDALAKPW LPLPLGLKPP SLDSVKVELQ RQGIPRIPPS CA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20570.1	5e-63	G2-like family protein