PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023532691.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | YABBY | ||||||||
Protein Properties | Length: 161aa MW: 18079.4 Da PI: 10.3893 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 137.5 | 1.5e-42 | 47 | 120 | 98 | 170 |
YABBY 98 sekl.senedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 ++ + s+ +e+pr+p ++rPPekrqrvPsaynrfik+eiqrik+ nPdishreafsaaaknWahfP+ihfgl XP_023532691.1 47 TFGMpSRGVADELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKNWAHFPHIHFGL 120 233336777899***999******************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 161 aa Download sequence |
MRGLLLPSAN QFHQLGHSFF SPSHNILENI PTPNSNYLIN QFAATNTFGM PSRGVADELP 60 RPPVINRPPE KRQRVPSAYN RFIKDEIQRI KSVNPDISHR EAFSAAAKNW AHFPHIHFGL 120 MPDQTVKKTN IRQQEGDHGS VVMKDNGFYA AASPNVGVSH F |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45190.1 | 1e-54 | YABBY family protein |