PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023532666.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family WRKY
Protein Properties Length: 279aa    MW: 30183.9 Da    PI: 9.6829
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023532666.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY102.32.8e-32208265359
                     -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     D y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+++dp+++++tYeg+Hnh+
  XP_023532666.1 208 DDYSWRKYGQKPIKGSPYPRGYYKCSSLrGCPARKHVERASDDPSMLIVTYEGDHNHS 265
                     99************************998****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MAVELLSAYT NAHLSAAMDQ DSAVHEAASG IHTLKKLISL LSHSPPSNLD SDCQAVANAA  60
VSHFKKAISL LGHSPRTGHA RFRRAPLDSS QIYNATPIQQ IPPPPLESAT TINFSHSSFP  120
AADSEINLQH QPSSSSFQIT DLSRVSSVVS KPSSGSKRKC GSENLGSGKC GESSGGRCHC  180
SKKSRKMRFK RVVRVPAISS KNADIPPDDY SWRKYGQKPI KGSPYPRGYY KCSSLRGCPA  240
RKHVERASDD PSMLIVTYEG DHNHSQSVAE ASSLILESW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G23320.11e-76WRKY family protein