PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023532250.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | C2H2 | ||||||||
Protein Properties | Length: 383aa MW: 42211.2 Da PI: 8.6129 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.3 | 0.00024 | 145 | 168 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 ++C+ Cg+ F+ + L++H+ H XP_023532250.1 145 FPCTACGEIFPKPQVLEQHQAAkH 168 89******************8777 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 383 aa Download sequence |
MAPTATGSFC NKFLALLLLI LHVGCFLLTN GDNRRRRHRP LQPKKRNESP PTALSLKPQK 60 ALTSSISFLK RIFSSKTCKM AIETTRPPST PARSSQHSIV TLIPQPVDTP NSKNANPIDS 120 AGTPQDSDIT TAEINQFFPL RNDIFPCTAC GEIFPKPQVL EQHQAAKHAV SELADSDSGK 180 NIVRIIFETG WTSREKSPKI LRILKIHNSQ KILSRFEEYR ESVKAKAARN GGAVKRWDER 240 CIADGNELLR FHCSTFLCDL GQNGNSSICG QQFCSICGII KSGFSHKLDG ISTLSSSWRA 300 HVAIPEDIEE EFKFMNVKRA ILVCRVVAGR IGSDNDEPEK DGGGFDSVVG RSGSGAQTTV 360 DEEELLVFNP RAVLPCFAIV YEV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G29660.1 | 1e-113 | C2H2 family protein |