PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023531753.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 204aa    MW: 23132.3 Da    PI: 7.0463
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023531753.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.93e-19554154
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkle 54
                    ++++GVr+++ +g+Wv+eIr+p        +r++lg+f taeeAa+a+++a+  + 
  XP_023531753.1  5 KKFRGVRQRH-WGSWVSEIRHP-----LlkRRIWLGTFETAEEAARAYDQAAILMS 54
                    59*******9.**********8.....334*********************98776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    
MPKFKKFRGV RQRHWGSWVS EIRHPLLKRR IWLGTFETAE EAARAYDQAA ILMSGRNAKT  60
NFPTTHDTNI TTTKDSPKGL SEILQAKLKK CCRTPSPSMT CLRLDTENSN IGVWQKRAGP  120
RSASSWVMTV ELGNKKSHNN EDDSLMGVVV ADQSPVAAEV AEIPSELDEE ERMVALQMVE  180
ELLHISYDEP NQMFEIQQGK DVYL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15360.12e-55ERF family protein