PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023531667.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

WOX

Protein Properties

Length: 316aa MW: 36980 Da PI: 7.1407

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023531667.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	69.8	3.3e-22	80	139	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eql++Leel+++ +r+psa+++++++++l +++ ++V++WFqN++a+e++ XP_023531667.1 80 SRWNPTPEQLRILEELYRRgTRTPSADQIQHITAQLrrfgKIEGKNVFYWFQNHKARERQ 139 8***************99************************************97 PP
2	Wus_type_Homeobox	118.4	3.2e-38	78	141	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +++RW+PtpeQ++iLeely++G+rtP++++iq+ita+L+++Gkie+kNVfyWFQN+kaRerqk+ XP_023531667.1 78 SSSRWNPTPEQLRILEELYRRGTRTPSADQIQHITAQLRRFGKIEGKNVFYWFQNHKARERQKR 141 579***********************************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 316 aa Download sequence
MWTLGHDDNG AQFCFSQPFH GGRKLRPLVP RPLPSLRLNA ANLPPQYYHL ANLLNDQSKR 60 ELLNNDDNGL SSPPVTVSSS RWNPTPEQLR ILEELYRRGT RTPSADQIQH ITAQLRRFGK 120 IEGKNVFYWF QNHKARERQK RRRQTAAEEH KYSDTEKGYE IEQTKTNRPR PTPPPSNLCS 180 NTTLSQECAK IQRTTKVVEL EEEEEEERRR DGTWNNDTVN CQLINLTRNT RHLNSVIEPC 240 NDPTRYNIVN DDEESETTTL QLFPLSSMKY CKYESENENE REERQDDRLD SNMIRSSTST 300 FSPGCFKFFE FLPLKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18010.1	1e-42	WOX family protein