PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023531607.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | TCP | ||||||||
Protein Properties | Length: 332aa MW: 35859.1 Da PI: 8.3589 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 119.7 | 3.5e-37 | 51 | 270 | 2 | 89 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg........ 88 a+k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti+WLlqqa+p+i+++tgt++++as+ a++ s+s++ s + XP_023531607.1 51 APKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAVAGSVSQQGVSLSaglqqkle 145 789******************************************************************88866666666663333344544455 PP TCP 89 ............................................................................................... 88 XP_023531607.1 146 elggggssraswgnlgrphlaaaaaaaaaaatatavwpssvsgfgfqssttagvaqsatnlanetsnyfhklgfpafdlpptnmgpmsftsilga 240 56666666666666666666666666655556666666555555555555555555555555555556666666666666666666666666666 PP TCP 89 .............................k 89 XP_023531607.1 241 ntqqlpglelglsqdphigainpqalnqfY 270 666666666666666666555555555541 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 332 aa Download sequence |
MDPKTSSSTT KQPQELVPNF LNFPQEHQQE QSIMGENKPP EIKEEGKKQL APKRSSNKDR 60 HTKVEGRGRR IRMPALCAAR IFQLTRELGH KSDGETIQWL LQQAEPSIIA ATGTGTIPAS 120 ALAAVAGSVS QQGVSLSAGL QQKLEELGGG GSSRASWGNL GRPHLAAAAA AAAAAATATA 180 VWPSSVSGFG FQSSTTAGVA QSATNLANET SNYFHKLGFP AFDLPPTNMG PMSFTSILGA 240 NTQQLPGLEL GLSQDPHIGA INPQALNQFY QQMGQARVHH HHQQHQQPPA KDDSQDSGER 300 ERKRERERDL YLVCTSSPCE WQSFKLFFTC QV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G27010.1 | 2e-66 | TCP family protein |