PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023531447.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 291aa    MW: 32131.7 Da    PI: 6.8711
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023531447.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.64.6e-08161203855
                     HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       r+RR+++ ++   L++llP++     kK++ +++Le+A +Y+k Lq
  XP_023531447.1 161 LARQRRQKLSDKTRCLQKLLPWD-----KKMDISTMLEEAFKYVKFLQ 203
                     679*******************9.....9******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    
MMVESSAGDD GSTNVWDDAC FNAMFSGVSL QSFLAGGNQN YCPLLLPSLF GGGYISDALT  60
FPDASTSLYP QPSSNFVAES IESSEPMNVY EQTAFVFHAS TSFPHLPDLR SLGQCSSSFN  120
KRARVDSVWN PLQIVEPMMR ECEVSSSAAV SPSVQIPRSA LARQRRQKLS DKTRCLQKLL  180
PWDKKMDIST MLEEAFKYVK FLQAQLLALQ SMPCESAIST NSNHHISGVF GGLERLSRNQ  240
LLQVLVNSPV AQTMLCSQSC CVFSAEQLGL IQKIAEKRVL LQQISTFRYK P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22100.11e-25bHLH family protein