PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023531335.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

bHLH

Protein Properties

Length: 437aa MW: 48410.7 Da PI: 7.8926

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023531335.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.9	3.1e-12	371	416	6	55
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR +i +++ +L+el+P+ +k + +++L +AveYIk Lq XP_023531335.1 371 SIAERVRRTKISERMRKLQELVPNM----DKQTNTSDMLDLAVEYIKGLQ 416 689*******************7....688***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 437 aa Download sequence
MEADFQQQQQ HILHEHHPQQ PQMSSGLTRY RSAPSSYFRR LTDREFCDQF FNRPSSPETE 60 QIFAQFMTSG SAGEGGGGPV CSSQNLDESQ KNAQAGEVFI TTEANQQTPY VNNETRAIHQ 120 QPSIVNSNFL PASSTPSSYH QNLMKPPLPN QNLIPEAEGS GSMGVDLKPQ IRTDGGRSSN 180 LIRQSSSPAG LFDYININAS GYAALTDMGN SGTGSSFNEE TSFSSPSRLK NFSPRALPPH 240 SSGLMSPMAG IEKKNIRETN QDTKGFAGSQ TSDYGSTSFP VGSWDESAVM SDNIVSRKAL 300 ENEDDKEKYS NLNISDTQKV DPRNRPPMLA RHLTLPSTAA EMNAVEKILQ FSDSVPCKLR 360 AKRGCATHPR SIAERVRRTK ISERMRKLQE LVPNMDKQTN TSDMLDLAVE YIKGLQKQVQ 420 TLTDNRAKCK CSHRQHQ

Sequence ? help Back to Top

Protein Sequence Length: 437 aa Download sequence

MEADFQQQQQ HILHEHHPQQ PQMSSGLTRY RSAPSSYFRR LTDREFCDQF FNRPSSPETE  60
QIFAQFMTSG SAGEGGGGPV CSSQNLDESQ KNAQAGEVFI TTEANQQTPY VNNETRAIHQ  120
QPSIVNSNFL PASSTPSSYH QNLMKPPLPN QNLIPEAEGS GSMGVDLKPQ IRTDGGRSSN  180
LIRQSSSPAG LFDYININAS GYAALTDMGN SGTGSSFNEE TSFSSPSRLK NFSPRALPPH  240
SSGLMSPMAG IEKKNIRETN QDTKGFAGSQ TSDYGSTSFP VGSWDESAVM SDNIVSRKAL  300
ENEDDKEKYS NLNISDTQKV DPRNRPPMLA RHLTLPSTAA EMNAVEKILQ FSDSVPCKLR  360
AKRGCATHPR SIAERVRRTK ISERMRKLQE LVPNMDKQTN TSDMLDLAVE YIKGLQKQVQ  420
TLTDNRAKCK CSHRQHQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51140.1	2e-63	bHLH family protein