PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023530991.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 343aa MW: 38967.3 Da PI: 8.385

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023530991.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	179.1	1.1e-55	17	143	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL kv ++ +++ ++i +vd++k+ePwdLp k+k +ekewyfF+ rd+ky+tg r+nrat+sgyWkatgkdk++++ XP_023530991.1 17 LPPGFRFHPTDEELISHYLFDKVMNSGFSC-RAIGDVDLNKSEPWDLPWKAKMGEKEWYFFCVRDRKYPTGLRTNRATESGYWKATGKDKDIYR- 109 79**************************.89***********888999************************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrle 129 +++lvg+kktLvfy+grapkgek+dWvmheyrle XP_023530991.1 110 GKSLVGMKKTLVFYRGRAPKGEKSDWVMHEYRLE 143 999***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 343 aa Download sequence
MAEHGVRAVN EEHHLELPPG FRFHPTDEEL ISHYLFDKVM NSGFSCRAIG DVDLNKSEPW 60 DLPWKAKMGE KEWYFFCVRD RKYPTGLRTN RATESGYWKA TGKDKDIYRG KSLVGMKKTL 120 VFYRGRAPKG EKSDWVMHEY RLEGKLSALN LPKTAKNEWV ICRVFQKNAN GKKVDISGIS 180 KFGHSILPPL TDSSRFKGEI KRDVQTVSNV PCFSTAMDSQ RKLEPMASLS SSSSSFPVIP 240 NPQTNSVYSA PNLQFPDCVL LQEHQSLLRT LLQTVNGGNP REPFKTERDK ISCISQETCL 300 TTDINNEISS VFPNLEMGRR LFDNSQEAPP CSMAPFDLDG FWN

Sequence ? help Back to Top

Protein Sequence Length: 343 aa Download sequence

MAEHGVRAVN EEHHLELPPG FRFHPTDEEL ISHYLFDKVM NSGFSCRAIG DVDLNKSEPW  60
DLPWKAKMGE KEWYFFCVRD RKYPTGLRTN RATESGYWKA TGKDKDIYRG KSLVGMKKTL  120
VFYRGRAPKG EKSDWVMHEY RLEGKLSALN LPKTAKNEWV ICRVFQKNAN GKKVDISGIS  180
KFGHSILPPL TDSSRFKGEI KRDVQTVSNV PCFSTAMDSQ RKLEPMASLS SSSSSFPVIP  240
NPQTNSVYSA PNLQFPDCVL LQEHQSLLRT LLQTVNGGNP REPFKTERDK ISCISQETCL  300
TTDINNEISS VFPNLEMGRR LFDNSQEAPP CSMAPFDLDG FWN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61430.1	1e-133	NAC family protein