PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023530834.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 411aa MW: 45743.5 Da PI: 4.9055

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023530834.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	105.4	3.3e-33	200	254	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +pr+rWtpeLHe+Fveav++LGG e+AtPk +l+lm+v+gLt++hvkSHLQkYR+ XP_023530834.1 200 RPRMRWTPELHESFVEAVDKLGGGENATPKGVLKLMNVEGLTIYHVKSHLQKYRT 254 59****************************************************8 PP
2	Myb_DNA-binding	57.3	3.6e-18	202	253	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e +v+av +lGgg t+k + + m+ +g+t +++ks++qky+ XP_023530834.1 202 RMRWTPELHESFVEAVDKLGGGenaTPKGVLKLMNvEGLTIYHVKSHLQKYR 253 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 411 aa Download sequence
MRHPIPRQVP PLVSNSGTVG HLFSSSSGFR NDFPLMQPLS RERNVQFSSF VSRSDDDGSL 60 LLLHGSSHSE EQSTMVTNDL NENSSSWSTD ALQDLLDFSE NAADQNVEAQ SLAGVLMSDD 120 RAKRNDWPDW ADQFISVDDT MEPNWSEIFS DANAGDAKVE VLKSSSAHFH APQNQTNQVD 180 SVPTAEFHSV SNSLSMSSTR PRMRWTPELH ESFVEAVDKL GGGENATPKG VLKLMNVEGL 240 TIYHVKSHLQ KYRTARYKPE SSEGSSGKKL NRIEEMKSLD LKTSMGITEA LRLQMDVQKR 300 LHEQLEIQRN LQLRIEEQGK YLREMFEQQR KMETKLKTSS SILENMPLAD DQPENSEQGR 360 VAAGTSTDNA DEDGLSAASR KQKAHESEAI LSSDDISSPD AKRSKSDATG L

Sequence ? help Back to Top

Protein Sequence Length: 411 aa Download sequence

MRHPIPRQVP PLVSNSGTVG HLFSSSSGFR NDFPLMQPLS RERNVQFSSF VSRSDDDGSL  60
LLLHGSSHSE EQSTMVTNDL NENSSSWSTD ALQDLLDFSE NAADQNVEAQ SLAGVLMSDD  120
RAKRNDWPDW ADQFISVDDT MEPNWSEIFS DANAGDAKVE VLKSSSAHFH APQNQTNQVD  180
SVPTAEFHSV SNSLSMSSTR PRMRWTPELH ESFVEAVDKL GGGENATPKG VLKLMNVEGL  240
TIYHVKSHLQ KYRTARYKPE SSEGSSGKKL NRIEEMKSLD LKTSMGITEA LRLQMDVQKR  300
LHEQLEIQRN LQLRIEEQGK YLREMFEQQR KMETKLKTSS SILENMPLAD DQPENSEQGR  360
VAAGTSTDNA DEDGLSAASR KQKAHESEAI LSSDDISSPD AKRSKSDATG L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04450.2	2e-88	G2-like family protein