PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023530730.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 332aa    MW: 35463 Da    PI: 6.1684
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023530730.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.33.7e-10182226554
                     HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     h+++Er RR+ri +++  L+el+P++      K + a++L + v+Y+k L
  XP_023530730.1 182 HSIAERLRRERIAERMKALQELVPSC-----NKTDRAAMLDEIVDYVKFL 226
                     99***********************8.....6****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    
MAGIPSEGLG DDFFEQILAV QPGYAGGATG DVVSIPMGLQ LGSGGGGDGL RGIAGLQGGG  60
GGGGMGMPLG LNLEQGFLRQ ERFRDELNNN NNNNNTTNNA SSSSTASSGI TERDSSVQHM  120
NALFPSFGHL QQTQQLRPPP PPLHLHQPFH NQTNPGMVAA VPQPSQIRPR VRARRGQATD  180
PHSIAERLRR ERIAERMKAL QELVPSCNKT DRAAMLDEIV DYVKFLRLQV KVLSMSRLGG  240
AGAVAQLVAD VPLSSVEGEG IESGANQQAW EKWSSDGTEQ QVAKLMEEDV GAAMQFLQSK  300
ALCIMPISLA SAIFRTHQAD PPIMVKPEMN TP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1187192RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02590.39e-66bHLH family protein