PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023530322.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family GATA
Protein Properties Length: 303aa    MW: 33241 Da    PI: 9.4552
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023530322.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA60.52.1e-19170203134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     Cs C+ttkTplWR+gp+g+k+LCnaCG+++rk +
  XP_023530322.1 170 CSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKAR 203
                     *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MAPPYRDSFP SNHDDLLRYS SSSDHHLFFP TTPLDSSPSS PLSFPLFPDL HRSNPDHPHS  60
LGFHHQEDDQ VHESNQEVET GLSFTIWKSE TSSNDHNRND SVKWSSSSSS SSSKIRLVIN  120
YNQTETPTKT IDALRNFQDL NPMPPSPSPS DQTNKRNTLN DGGGAIIRTC SDCNTTKTPL  180
WRSGPRGPKS LCNACGIRQR KARRAMAEAA NGGNSTAVVL KTNKAIIKPA ATMKRKHKEV  240
VATTTAAAAS AAGGGGRRKL CVEDVKMGRR LSEISSTYQR VFPQDEREAA ILLMTLSYGL  300
LHG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26150.11e-27GATA family protein