PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023530004.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family NAC
Protein Properties Length: 294aa    MW: 33774 Da    PI: 8.6008
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023530004.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM157.17.4e-49171453128
             NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk. 95 
                     pGfrFhPtdeelv++yL+ kve++ ++l   ik++diyk++Pw+Lp  + + ++kewyf++kr +ky+++ r+nr+t sg+Wkatg dk+v+s+ 
  XP_023530004.1  17 PGFRFHPTDEELVSFYLRGKVEKRGIRL-GLIKQMDIYKHNPWELPyGSSNVGDKEWYFYCKRGRKYKNSIRPNRVTGSGFWKATGIDKPVYSNg 110
                     9***************************.99***************65777799***************************************97 PP

             NAM  96 ..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       ++e +glkktLv+y+g+a kg+kt W+mhe+rl
  XP_023530004.1 111 geGSECIGLKKTLVYYRGSAGKGTKTYWMMHEFRL 145
                     666667***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MDSTPQVCEG EDEIPLPGFR FHPTDEELVS FYLRGKVEKR GIRLGLIKQM DIYKHNPWEL  60
PYGSSNVGDK EWYFYCKRGR KYKNSIRPNR VTGSGFWKAT GIDKPVYSNG GEGSECIGLK  120
KTLVYYRGSA GKGTKTYWMM HEFRLPPSNS YNVAQEAEIW TLCRIFKRNM SCRRYGSNWN  180
KQTPTKNPLT DQKNTKPCNE QVMGSGEVSY NNWSCDSMII QNEQKAVVPS DPNNREWMNR  240
NYQYYSSSSS MAPSPVSSGI ISAPIAFPTN EQLDVNDFFT NSNWDELRSV VDML
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43000.13e-82NAC family protein