PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023529024.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

WOX

Protein Properties

Length: 248aa MW: 26126.9 Da PI: 7.1448

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023529024.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	48.9	1.1e-15	18	78	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+++eq+ +Le+ F++ +p ++e ++ k l ++ +++V++WFqNrR + ++ XP_023529024.1 18 RSRWTPKPEQILILESIFNSgMVNPPKDETVRIRKLLekfgSVGDANVFYWFQNRRSRSRR 78 89***************99***********************************997 PP
2	Wus_type_Homeobox	107.5	8e-35	17	80	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +r+RWtP+peQi iLe++++sG+++P+k+e+ ri++ Le++G ++d+NVfyWFQNr++R+r++q XP_023529024.1 17 VRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQ 80 589***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 248 aa Download sequence
MENHGDDPNS SERAEPVRSR WTPKPEQILI LESIFNSGMV NPPKDETVRI RKLLEKFGSV 60 GDANVFYWFQ NRRSRSRRRQ RQLQAAATHQ ATGGGGGGGG GGGGGNGGRY NSGVMNFAGS 120 SSYFGGGSSS SSSSASGGGG GGGSSESGCF SMVGHMGLSE IDQQMGVAPS FCPPETLNLE 180 FQSGYNIIIF INGVPTEVPK GPVDMKAMFG QETVLVHSSG LPVLTNEFGI SLHSLQHGES 240 YFLVSRPT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17810.1	1e-34	WOX family protein