PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_023528921.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 233aa MW: 26252.9 Da PI: 9.475 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 95.5 | 8e-30 | 18 | 137 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lp+G+rF+Ptdeelv +yLk+kv g +l++ +vi+e++++ ++Pw Lp + +++ +fFsk+++ r + g+Wk+ gk+k ++++ XP_023528921.1 18 LPVGYRFSPTDEELVEHYLKRKVFGLPLPA-SVIPEFNVFLTDPWGLPGDL---KEKRFFFSKQKSFL----RM--NAGCGIWKSIGKEKFIITQ 102 799***************************.99***************544...45679998876654....33..4578*************98 PP NAM 96 .kgelvglkktLvfykgrapk.gektdWvmheyrl 128 ++l gl+k+Lvf + + p+ ++ t+Wvmheyrl XP_023528921.1 103 gINQLFGLRKSLVFSESKFPErTRTTRWVMHEYRL 137 55677**********887665156789******98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 233 aa Download sequence |
MFPMENTSNF VFDGGIRLPV GYRFSPTDEE LVEHYLKRKV FGLPLPASVI PEFNVFLTDP 60 WGLPGDLKEK RFFFSKQKSF LRMNAGCGIW KSIGKEKFII TQGINQLFGL RKSLVFSESK 120 FPERTRTTRW VMHEYRLARS AATSNSTQIE VGDWAVYCLF QKRRKHKRKG VKENQRVAAA 180 QGSILDLTVE DSWEFPQPCA SCSSGVTQVS SNGTGSTDQE ETSGGLDLGL GFS |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 163 | 169 | RRKHKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G13180.1 | 2e-41 | NAC family protein |