PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023528661.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

TCP

Protein Properties

Length: 317aa MW: 34179.9 Da PI: 7.9116

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023528661.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	118.5	8.4e-37	69	201	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg........ 88 a+k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti+WLlqqa+p+i++ tgt++++as+ a++ s+s++ s + XP_023528661.1 69 APKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAVTGTGTIPASALAAAAGSVSQQGASLSaglhqkle 163 789******************************************************************99955555555553333335666666 PP TCP 89 .....................................k 89 XP_023528661.1 164 efggggssranwgnlgrphlaatattglwpssvsgfgY 201 77777766666766665555544444444444444431 PP

Sequence ? help Back to Top
Protein Sequence Length: 317 aa Download sequence
MDPKTSSATK QPQEVVPNFL KLPQEQQQEQ RQEQEQEQRQ SIMGENKPAE IKDFQIAVAE 60 KEEGKKQLAP KRSSNKDRHT KVEGRGRRIR MPALCAARIF QLTRELGHKS DGETIQWLLQ 120 QAEPSIIAVT GTGTIPASAL AAAAGSVSQQ GASLSAGLHQ KLEEFGGGGS SRANWGNLGR 180 PHLAATATTG LWPSSVSGFG YQSSTAAAAA AAAQSATNLA NETSNYFHKL GFPPFDLTST 240 NMGPMSFTSI LGGNAQQLPG LELGLSQDGH IGVINPQTLN QIYQQMGQAR VHQHHHQHQQ 300 QQQQQQPPAK DDSQDSG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27010.1	3e-72	TCP family protein