PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023528048.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 380aa MW: 42075.7 Da PI: 7.761

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023528048.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	103.4	1.4e-32	194	247	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt+ LH+rFv+ave+LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ XP_023528048.1 194 PRMRWTTSLHARFVHAVEHLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 247 9****************************************************7 PP
2	Myb_DNA-binding	48.6	1.9e-15	195	246	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWTt ++ ++v+av+ lGg+ t+k++ + m k +tl ++ks++q+y+ XP_023528048.1 195 RMRWTTSLHARFVHAVEHLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 246 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 380 aa Download sequence
MPLEGVFIEP SSTPLPDLSL QISPPNVSSS SSSSSSSSSS IRTLSHGFAQ TSFDLLIQRN 60 DPRAHTELSL GTNNNNNNNN NNNNSLSGVP LDTPTPPPRL RGLSMFDISS DGLQPIKGIP 120 VYHNRPFPFL GVDQKDHYFH HQFPSPCFFP NYSNSNGVVQ MGYHHHHHHR GIGGNISSPR 180 FLQKLPAKRS MRAPRMRWTT SLHARFVHAV EHLGGHERAT PKSVLELMDV KDLTLAHVKS 240 HLQMYRTVKT TDKPAASSGQ SDGSGEDEVS PTLGTISGGH GPKQFSDQRA SPDRSGQQPA 300 DSEFGSSTVW SNCSRDVWAQ TNGNEMDVIR PSLYAKMQQK CMHQIQECDS GAMKRYNSEC 360 CNKPSLEFRL GRAEWDVEEH

Sequence ? help Back to Top

Protein Sequence Length: 380 aa Download sequence

MPLEGVFIEP SSTPLPDLSL QISPPNVSSS SSSSSSSSSS IRTLSHGFAQ TSFDLLIQRN  60
DPRAHTELSL GTNNNNNNNN NNNNSLSGVP LDTPTPPPRL RGLSMFDISS DGLQPIKGIP  120
VYHNRPFPFL GVDQKDHYFH HQFPSPCFFP NYSNSNGVVQ MGYHHHHHHR GIGGNISSPR  180
FLQKLPAKRS MRAPRMRWTT SLHARFVHAV EHLGGHERAT PKSVLELMDV KDLTLAHVKS  240
HLQMYRTVKT TDKPAASSGQ SDGSGEDEVS PTLGTISGGH GPKQFSDQRA SPDRSGQQPA  300
DSEFGSSTVW SNCSRDVWAQ TNGNEMDVIR PSLYAKMQQK CMHQIQECDS GAMKRYNSEC  360
CNKPSLEFRL GRAEWDVEEH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16560.1	5e-58	G2-like family protein