PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023528047.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 381aa MW: 42119.7 Da PI: 7.761

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023528047.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	103.4	1.4e-32	195	248	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt+ LH+rFv+ave+LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ XP_023528047.1 195 PRMRWTTSLHARFVHAVEHLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 248 9****************************************************7 PP
2	Myb_DNA-binding	48.6	1.9e-15	196	247	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWTt ++ ++v+av+ lGg+ t+k++ + m k +tl ++ks++q+y+ XP_023528047.1 196 RMRWTTSLHARFVHAVEHLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 247 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence
MPLEGVFIEP SSTPLPDLSL QISPPNVSSS SSSSSSSSSS IRTLSHGFAQ TSFDLLIQRN 60 DPRAHTELSL GTNNNNNNNN NNNNSLSGVP LDTPTPPPRL RGLSMFDISS DGLQPIKGIP 120 VYHNRPFPFL GVDQKDHYFH HQFPSPCFFP NYSNSNGVVQ MGYHHHHHHR GIGGNISSPR 180 FNNGKLPAKR SMRAPRMRWT TSLHARFVHA VEHLGGHERA TPKSVLELMD VKDLTLAHVK 240 SHLQMYRTVK TTDKPAASSG QSDGSGEDEV SPTLGTISGG HGPKQFSDQR ASPDRSGQQP 300 ADSEFGSSTV WSNCSRDVWA QTNGNEMDVI RPSLYAKMQQ KCMHQIQECD SGAMKRYNSE 360 CCNKPSLEFR LGRAEWDVEE H

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence

MPLEGVFIEP SSTPLPDLSL QISPPNVSSS SSSSSSSSSS IRTLSHGFAQ TSFDLLIQRN  60
DPRAHTELSL GTNNNNNNNN NNNNSLSGVP LDTPTPPPRL RGLSMFDISS DGLQPIKGIP  120
VYHNRPFPFL GVDQKDHYFH HQFPSPCFFP NYSNSNGVVQ MGYHHHHHHR GIGGNISSPR  180
FNNGKLPAKR SMRAPRMRWT TSLHARFVHA VEHLGGHERA TPKSVLELMD VKDLTLAHVK  240
SHLQMYRTVK TTDKPAASSG QSDGSGEDEV SPTLGTISGG HGPKQFSDQR ASPDRSGQQP  300
ADSEFGSSTV WSNCSRDVWA QTNGNEMDVI RPSLYAKMQQ KCMHQIQECD SGAMKRYNSE  360
CCNKPSLEFR LGRAEWDVEE H

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16560.1	5e-55	G2-like family protein