PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023528046.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 387aa MW: 42718.4 Da PI: 7.5527

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023528046.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	103.3	1.4e-32	201	254	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt+ LH+rFv+ave+LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ XP_023528046.1 201 PRMRWTTSLHARFVHAVEHLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 254 9****************************************************7 PP
2	Myb_DNA-binding	48.6	1.9e-15	202	253	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWTt ++ ++v+av+ lGg+ t+k++ + m k +tl ++ks++q+y+ XP_023528046.1 202 RMRWTTSLHARFVHAVEHLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 253 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 387 aa Download sequence
MPLEGVFIEP SSTPLPDLSL QISPPNVSSS SSSSSSSSSS IRTLSHGFAQ TSFDLLIQRN 60 DPRAHTELSL GTNNNNNNNN NNNNSLSGVP LDTPTPPPRL RGLSMFDISS DGLQPIKGIP 120 VYHNRPFPFL GVDQKDHYFH HQFPSPCFFP NYSNSNGVVQ MGYHHHHHHR GIGGNISSPR 180 FNNGVVSIEA KLPAKRSMRA PRMRWTTSLH ARFVHAVEHL GGHERATPKS VLELMDVKDL 240 TLAHVKSHLQ MYRTVKTTDK PAASSGQSDG SGEDEVSPTL GTISGGHGPK QFSDQRASPD 300 RSGQQPADSE FGSSTVWSNC SRDVWAQTNG NEMDVIRPSL YAKMQQKCMH QIQECDSGAM 360 KRYNSECCNK PSLEFRLGRA EWDVEEH

Sequence ? help Back to Top

Protein Sequence Length: 387 aa Download sequence

MPLEGVFIEP SSTPLPDLSL QISPPNVSSS SSSSSSSSSS IRTLSHGFAQ TSFDLLIQRN  60
DPRAHTELSL GTNNNNNNNN NNNNSLSGVP LDTPTPPPRL RGLSMFDISS DGLQPIKGIP  120
VYHNRPFPFL GVDQKDHYFH HQFPSPCFFP NYSNSNGVVQ MGYHHHHHHR GIGGNISSPR  180
FNNGVVSIEA KLPAKRSMRA PRMRWTTSLH ARFVHAVEHL GGHERATPKS VLELMDVKDL  240
TLAHVKSHLQ MYRTVKTTDK PAASSGQSDG SGEDEVSPTL GTISGGHGPK QFSDQRASPD  300
RSGQQPADSE FGSSTVWSNC SRDVWAQTNG NEMDVIRPSL YAKMQQKCMH QIQECDSGAM  360
KRYNSECCNK PSLEFRLGRA EWDVEEH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16560.1	2e-54	G2-like family protein