PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023528045.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 390aa MW: 42901.6 Da PI: 9.1267

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023528045.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	103.3	1.5e-32	236	289	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt+ LH+rFv+ave+LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ XP_023528045.1 236 PRMRWTTSLHARFVHAVEHLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 289 9****************************************************7 PP
2	Myb_DNA-binding	48.5	1.9e-15	237	288	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWTt ++ ++v+av+ lGg+ t+k++ + m k +tl ++ks++q+y+ XP_023528045.1 237 RMRWTTSLHARFVHAVEHLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 288 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 390 aa Download sequence
MPLEGVFIEP SSTPLPDLSL QISPPNVSSS SSSSSSSSSS IRTLSHGFAQ TSFDLLIQRN 60 DPRAHTELSL GTNNNNNNNN NNNNSLSGVP LDTPTPPPRL RGLSMFDISS DGLQPIKGIP 120 VYHNRPFPFL GVDQKDHYFH HQFPSPCFFP NYSNSNGVVQ MGYHHHHHHR GIGGNISSPR 180 FNNGVVSIEA VKSLNYNNHS NYSNAASSSS HVCSHGMMMR SRFLQKLPAK RSMRAPRMRW 240 TTSLHARFVH AVEHLGGHER ATPKSVLELM DVKDLTLAHV KSHLQMYRTV KTTDKPAASS 300 GQSDGSGEDE VSPTLGTISG GHGPKQFSDQ RASPDRSGQQ PADSEFGSST VWSNCSRDVW 360 AQTNGNEMDV IRPSLYAKMQ QKCMHQIQVQ

Sequence ? help Back to Top

Protein Sequence Length: 390 aa Download sequence

MPLEGVFIEP SSTPLPDLSL QISPPNVSSS SSSSSSSSSS IRTLSHGFAQ TSFDLLIQRN  60
DPRAHTELSL GTNNNNNNNN NNNNSLSGVP LDTPTPPPRL RGLSMFDISS DGLQPIKGIP  120
VYHNRPFPFL GVDQKDHYFH HQFPSPCFFP NYSNSNGVVQ MGYHHHHHHR GIGGNISSPR  180
FNNGVVSIEA VKSLNYNNHS NYSNAASSSS HVCSHGMMMR SRFLQKLPAK RSMRAPRMRW  240
TTSLHARFVH AVEHLGGHER ATPKSVLELM DVKDLTLAHV KSHLQMYRTV KTTDKPAASS  300
GQSDGSGEDE VSPTLGTISG GHGPKQFSDQ RASPDRSGQQ PADSEFGSST VWSNCSRDVW  360
AQTNGNEMDV IRPSLYAKMQ QKCMHQIQVQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16560.1	3e-51	G2-like family protein