PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_023528044.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
|
||||||||
Family | G2-like | ||||||||
Protein Properties | Length: 422aa MW: 46646.7 Da PI: 8.1445 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 103.2 | 1.6e-32 | 236 | 289 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt+ LH+rFv+ave+LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ XP_023528044.1 236 PRMRWTTSLHARFVHAVEHLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 289 9****************************************************7 PP | |||||||
2 | Myb_DNA-binding | 48.4 | 2.2e-15 | 237 | 288 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWTt ++ ++v+av+ lGg+ t+k++ + m k +tl ++ks++q+y+ XP_023528044.1 237 RMRWTTSLHARFVHAVEHLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 288 89************************************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 422 aa Download sequence |
MPLEGVFIEP SSTPLPDLSL QISPPNVSSS SSSSSSSSSS IRTLSHGFAQ TSFDLLIQRN 60 DPRAHTELSL GTNNNNNNNN NNNNSLSGVP LDTPTPPPRL RGLSMFDISS DGLQPIKGIP 120 VYHNRPFPFL GVDQKDHYFH HQFPSPCFFP NYSNSNGVVQ MGYHHHHHHR GIGGNISSPR 180 FNNGVVSIEA VKSLNYNNHS NYSNAASSSS HVCSHGMMMR SRFLQKLPAK RSMRAPRMRW 240 TTSLHARFVH AVEHLGGHER ATPKSVLELM DVKDLTLAHV KSHLQMYRTV KTTDKPAASS 300 GQSDGSGEDE VSPTLGTISG GHGPKQFSDQ RASPDRSGQQ PADSEFGSST VWSNCSRDVW 360 AQTNGNEMDV IRPSLYAKMQ QKCMHQIQEC DSGAMKRYNS ECCNKPSLEF RLGRAEWDVE 420 EH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G16560.1 | 6e-59 | G2-like family protein |