PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023526909.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family FAR1
Protein Properties Length: 272aa    MW: 31125 Da    PI: 6.7262
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023526909.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR192.26.9e-29108195291
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                     fYn+YA++vGF +r+sk ++s+r+g+ + r +vC+keg+r ++k++  k  r+raetr+gC+a++ v+k ++gkw+vtk+++eH+H+l+p
  XP_023526909.1 108 FYNAYATRVGFVIRVSKLSRSRRDGTAIGRALVCNKEGYRMPDKRE--KIVRQRAETRVGCRAMILVRKVNSGKWVVTKFVKEHTHPLSP 195
                     ******************************************9988..9**************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
YPRGFDFGSF FFDGLWVVGV SVFVEFGVDG DSEVVGNSTL VDSKPLDENE TGVSSIERIF  60
DEDRDEKIIQ DSSGRNAILD SVPGLPIVQA DEPYVGQEFE NEAAAHAFYN AYATRVGFVI  120
RVSKLSRSRR DGTAIGRALV CNKEGYRMPD KREKIVRQRA ETRVGCRAMI LVRKVNSGKW  180
VVTKFVKEHT HPLSPGKGRR DCIYDQYPNE HDKIRELSQQ LAIEKKRSAT YKRHLEVIFE  240
YIDEHNDNLS RKIQHIVDNV KEMESIEQQS HR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.27e-96FAR1 family protein