PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023526833.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | C2H2 | ||||||||
Protein Properties | Length: 315aa MW: 36084.2 Da PI: 8.2937 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 18.1 | 7.3e-06 | 22 | 42 | 3 | 23 |
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C+ Cg F+ + +Lk+H+++H XP_023526833.1 22 CQECGAEFRKPAYLKQHMQSH 42 *******************99 PP | |||||||
2 | zf-C2H2 | 15 | 6.9e-05 | 48 | 72 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y C+ C s++rk++L+rH+ H XP_023526833.1 48 YICSidGCEASYRRKDHLTRHLLHH 72 899999***************9987 PP | |||||||
3 | zf-C2H2 | 21.4 | 6.5e-07 | 115 | 139 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++Cp Cgk+F+ s+L++H +H XP_023526833.1 115 FVCPedGCGKVFRYASQLQKHEHSH 139 89*******************9888 PP | |||||||
4 | zf-C2H2 | 19.7 | 2.3e-06 | 208 | 231 | 3 | 23 |
ET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirt.H 23 C+ C+k+Fs+ snL++H+++ H XP_023526833.1 208 CTheGCSKVFSTISNLHQHMKVvH 231 88889****************988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 315 aa Download sequence |
MESGKHNDEG GDKTKNGKSN ICQECGAEFR KPAYLKQHMQ SHSLERPYIC SIDGCEASYR 60 RKDHLTRHLL HHQGLIIKCP IEGCSREFAY ISCVNRHLKE CHEGGAPPEE CQKQFVCPED 120 GCGKVFRYAS QLQKHEHSHF KLDSIEACCA EPGCMKTFTN KKCLQAHMQS CHQYINCEIC 180 GEKKLRKNMK QHLRQKHESQ GSPEAIPCTH EGCSKVFSTI SNLHQHMKVV HLGEKPFACG 240 FPGCGMRFGY KHVRDNHEKK GQHVYTNGDF EAADEQFRSK PRGGRKRIRP TVEMLIRKRI 300 TPPSELDFIM IDEEC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72050.2 | 1e-121 | C2H2 family protein |