PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023526804.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | ERF | ||||||||
Protein Properties | Length: 291aa MW: 33262.2 Da PI: 6.0031 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.8 | 3.1e-19 | 97 | 146 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +++GVr+++ +g+W+AeIrdp r +r++lg+++taeeAa +++a+ +l+g XP_023526804.1 97 KFRGVRRRP-WGKWAAEIRDPL----RrTRVWLGTYDTAEEAAVVYDRAAVRLRG 146 89*******.**********73....45*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 291 aa Download sequence |
MEFQYPSMGR VCSAGIKFRE VRTITDKPAT ETKLVRITYT DGDATDSSSG EDEEPSLIRH 60 VKRHVTEIRL LTTDCSKKPL PPKSRVKPPS NSESHRKFRG VRRRPWGKWA AEIRDPLRRT 120 RVWLGTYDTA EEAAVVYDRA AVRLRGPNAL TNFVAEAPTS KTTVVTYLPP PSPPPPPENH 180 STAAVGVSYS KESRNHCSPT SVLRLEEQNW RPIEHLSEES GLEEEFNWLY DRNSNSFLFN 240 LRSPQPLFSD QMELEIPKWE DFGDISVDFD SCKWDVENYF QDPSFSIALT D |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G27950.1 | 2e-42 | ERF family protein |