PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023526791.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | NAC | ||||||||
Protein Properties | Length: 237aa MW: 26952.5 Da PI: 9.4332 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 159.5 | 1.4e-49 | 14 | 138 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+ +yL kk+ +++l++ vi+++d+++++PwdLp e+e yfFs+r+ ky++g+r+nrat sgyWkatg d++++s+ XP_023526791.1 14 LPPGFRFHPTDEELILQYLIKKALSSPLPA-AVIPDADVCRFDPWDLPGD---LERERYFFSTRQAKYSNGRRTNRATGSGYWKATGIDRRIVSS 104 79****************************.89***************44...46899**********************************998 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++lvglkktLvfy+g+ p+g +tdWvmheyrl XP_023526791.1 105 kENRLVGLKKTLVFYTGNPPNGLRTDWVMHEYRL 138 67778***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
MENLTFLKNG VLRLPPGFRF HPTDEELILQ YLIKKALSSP LPAAVIPDAD VCRFDPWDLP 60 GDLERERYFF STRQAKYSNG RRTNRATGSG YWKATGIDRR IVSSKENRLV GLKKTLVFYT 120 GNPPNGLRTD WVMHEYRLVG DSEAPPSAIN GELPTLNHNW VLCRIFLKKS TKNRDEKKKI 180 CTPVFHQFLR TDLNLAAPCS SSSGSSGVTE ISVNSHQEQE QEQEETSSCH SLRNRRS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13180.1 | 3e-86 | NAC family protein |