PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023526753.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family MYB_related
Protein Properties Length: 262aa    MW: 29575.9 Da    PI: 5.2123
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023526753.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding50.93.6e-163176148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg++T+eE++l ++++  lG++ W++Ia+ ++ gRt++++k+ w+++l
   XP_023526753.1 31 RGPFTPEEEKLVIQLHGILGNR-WAAIASQLP-GRTDNEIKNLWNTHL 76
                     89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MAKAWSCHGL LRCGKSCRLR WTNYLRPDIK RGPFTPEEEK LVIQLHGILG NRWAAIASQL  60
PGRTDNEIKN LWNTHLKKRL LCIGIDPQTH EPFNSRCSSS TAPASPTTRH MAQWESARLE  120
AEARLSRESS LFTPLPMETT TDSDFFLQIW NSEVGDSFRK CREDKTTCHS QSSLSSSIKC  180
ESVYIVATHN GVDYTGSSAM ESNENEETEY KNFKSMADIV MSKSDSSSAN EFEESSDSAL  240
ELLLDFPINN DMSFLEENNT NT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61250.12e-78MYB family protein