PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023526749.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

MYB_related

Protein Properties

Length: 304aa MW: 34368.6 Da PI: 5.0945

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023526749.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.6	4.5e-16	73	118	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+eE++l ++++ lG++ W++Ia+ ++ gRt++++k+ w+++l XP_023526749.1 73 RGPFTPEEEKLVIQLHGILGNR-WAAIASQLP-GRTDNEIKNLWNTHL 118 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 304 aa Download sequence
MVPKSILFSA NSLLVMEWLL ASTILQNKYS WSFDLSLVSD FASSVILRFR GLLRCGKSCR 60 LRWTNYLRPD IKRGPFTPEE EKLVIQLHGI LGNRWAAIAS QLPGRTDNEI KNLWNTHLKK 120 RLLCIGIDPQ THEPFNSRCS SSTAPASPTT RHMAQWESAR LEAEARLSRE SSLFTPLPME 180 TTTDSDFFLQ IWNSEVGDSF RKCREDKTTC HSQSSLSSSI KCESVYIVAT HNGVDYTGSS 240 AMESNENEET EYKNFKSMAD IVMSKSDSSS ANEFEESSDS ALELLLDFPI NNDMSFLEEN 300 NTNT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G61250.1	2e-78	MYB family protein