PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023526721.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | ERF | ||||||||
Protein Properties | Length: 185aa MW: 20281 Da PI: 7.5713 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 63.9 | 3.4e-20 | 70 | 120 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ++y+G+r+++ +g+W+AeIrdp + r++lg++ taeeAa a+++a+ +++g XP_023526721.1 70 TKYRGIRQRP-WGKWAAEIRDPQ----KgLRVWLGTYNTAEEAAIAYDQAAVRIRG 120 69********.**********94....34************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 185 aa Download sequence |
MCGGAIISDP VVDTTFSDLL GLDHNLSANS SHPSQVKIES PDGCEEAPAA AAAAEGLAGE 60 VKKPKKIRKT KYRGIRQRPW GKWAAEIRDP QKGLRVWLGT YNTAEEAAIA YDQAAVRIRG 120 KKAKLNFTHP PPPPPPPPQQ HLPPNNIQPT LESILGLYPS PPVEPSADPW WVDDLLIYQQ 180 QNFQL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47520.1 | 1e-24 | ERF family protein |