PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023526677.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | MYB | ||||||||
Protein Properties | Length: 217aa MW: 24352.9 Da PI: 9.6762 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52 | 1.6e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +grWT+eEdell ++++ G g+W++ ++ g+ R++k+c++rw +yl XP_023526677.1 14 KGRWTAEEDELLTNYIRANGEGSWRSLPKNAGLLRCGKSCRLRWINYL 61 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 54.1 | 3.6e-17 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ T+eE++ +v++++ lG++ W+ Ia +++ gRt++++k++w+++l XP_023526677.1 67 RGNITAEEEQMIVKLHNVLGNR-WSVIAGHLP-GRTDNEIKNYWNSHL 112 7999******************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 217 aa Download sequence |
MGRSPCCEKV GLRKGRWTAE EDELLTNYIR ANGEGSWRSL PKNAGLLRCG KSCRLRWINY 60 LRTNLKRGNI TAEEEQMIVK LHNVLGNRWS VIAGHLPGRT DNEIKNYWNS HLSRRIYTVT 120 RPSATKSSSP ITCLLGIIPV PKRKRDVTCG RREEQGGIVK GKEEDDGKTL GKEVILRSIM 180 GDGDGEGLGP YEWLDGEIMT LNNGMVKACG KWESMHG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G49330.1 | 2e-77 | MYB family protein |