PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023526590.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 247aa MW: 28493.3 Da PI: 8.8759 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 93.6 | 9.3e-30 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+ rqvtfskRr+g+lKKA+E+SvLCda+va+i+fs++gkl+eyss XP_023526590.1 9 KRIENKISRQVTFSKRRAGLLKKAHEISVLCDADVALIVFSTKGKLFEYSS 59 79***********************************************96 PP | |||||||
2 | K-box | 102.4 | 6.1e-34 | 84 | 175 | 9 | 100 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 +++ ++s++qe+ kL +++e q+++Rh+lGe+L++L+l+eLq+LeqqL++slk+iR++Kn+l+ e+i++l kkekelqeen++L +k++e XP_023526590.1 84 SDSESQASWCQEYPKLAARLEIVQKNLRHYLGEELDPLNLRELQSLEQQLDSSLKRIRARKNQLMQESISKLHKKEKELQEENRKLANKVKE 175 45566789*********************************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence |
MGRGRVQLKR IENKISRQVT FSKRRAGLLK KAHEISVLCD ADVALIVFST KGKLFEYSSH 60 SSMEKILEKY ERYSYAERPL APNSDSESQA SWCQEYPKLA ARLEIVQKNL RHYLGEELDP 120 LNLRELQSLE QQLDSSLKRI RARKNQLMQE SISKLHKKEK ELQEENRKLA NKVKENETVW 180 VERGHCELTN LDHNHHILAT PPPLPSLSIG VNCHGRGSDE DETRPTSTNN IQIPAWMLSH 240 VTENPHN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G26310.1 | 5e-69 | MIKC_MADS family protein |