PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023526505.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family C2H2
Protein Properties Length: 259aa    MW: 29023.7 Da    PI: 6.7886
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023526505.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.20.000266284123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C+ C + F++   L  H+++H
  XP_023526505.1 62 YSCSFCRRDFRSAQALGGHMNVH 84
                    99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MWRKQQEERQ THDCDDSVDS QSSKAKTKTP FAYEDPFSWE EQAFAEDAAG GLGGCVWPPR  60
SYSCSFCRRD FRSAQALGGH MNVHRRDRAR LKQSPNTPNH NPFTNSFPFQ SPSSSSSSTF  120
SYHLPTPKPY LVHPPPPNHR LTSKAGKDEN FTNSCSRVTD NHHVGIGILD DGLNFSFGPP  180
WPTSVLFDDD GGREEAGADT SCKKRKTDDE TSSIQLYVKS NNSVENHHRR RRDPIESEVI  240
GVSSSPFHDL DLELRLGGV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37740.14e-26C2H2 family protein