PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023524877.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family GATA
Protein Properties Length: 312aa    MW: 33950.4 Da    PI: 6.1755
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023524877.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA542.3e-17209243135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C +C + kTp+WR gp g+ktLCnaCG++y++ +l
  XP_023524877.1 209 CLHCAAEKTPQWRTGPTGPKTLCNACGVRYKSGRL 243
                     99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MEVPGYLLGG FYGAGASQFS PEKHHSTTDH FAVDEYLLDF SNDDVAMTSG FFDNVARNCS  60
DSSTVTAIDS CNSSISSGDN QALGNFGSAS FGEAQFSTEL CIPRDDLAEL EWLSNFVEDS  120
FSTEEIEKDF PPIPFLTGTA AHPETPSSSG TTAFGYGSAK TTSFFEHEAL PGKARSKRSR  180
GSPCDWSTRL LQAGGPVKSE TTSPSGRKCL HCAAEKTPQW RTGPTGPKTL CNACGVRYKS  240
GRLVPEYRPA ASPTFVSTKH SNSHRKVMEL RRQKEVQQQE QFLSQGSILG RSNGCDEYLV  300
HRPNGGDFRH ML
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.13e-72GATA family protein